| Package | Description |
|---|---|
| com.hfg.bio | |
| com.hfg.bio.glyco | |
| com.hfg.bio.proteinproperty |
Classes for calculating physical properties of proteins.
|
| com.hfg.bio.seq | |
| com.hfg.bio.seq.genomic | |
| com.hfg.chem | |
| com.hfg.chem.format | |
| com.hfg.chem.solution |
| Class and Description |
|---|
| Charge
Enumerated charge types.
|
| Element
Atomic element.
|
| IonizableGroup
Ionizable chemical group.
|
| Matter
Interface for an elemental composition and mass tracking object.
|
| Molecule
Generic chemical entity.
|
| Class and Description |
|---|
| Element
Atomic element.
|
| IonizableGroup
Ionizable chemical group.
|
| Matter
Interface for an elemental composition and mass tracking object.
|
| Molecule
Generic chemical entity.
|
| Class and Description |
|---|
| IonizableGroup
Ionizable chemical group.
|
| Class and Description |
|---|
| Element
Atomic element.
|
| Matter
Interface for an elemental composition and mass tracking object.
|
| Molecule
Generic chemical entity.
|
| Class and Description |
|---|
| Matter
Interface for an elemental composition and mass tracking object.
|
| Molecule
Generic chemical entity.
|
| Class and Description |
|---|
| Atom
Represents an atom - an element plus coordinates.
|
| Atom.ChiralityOrder |
| Charge
Enumerated charge types.
|
| CovalentBond
Represents a covalent bond between atoms.
|
| Element
Atomic element.
|
| ElementalComposition
Container for elemental composition data.
|
| IonizableGroup
Ionizable chemical group.
|
| Isotope
Isotope.
|
| Matter
Interface for an elemental composition and mass tracking object.
|
| Molecule
Generic chemical entity.
|
| ValenceModel
Valence Model for assigning valence values to Atoms.
|
| Class and Description |
|---|
| Molecule
Generic chemical entity.
|
| Class and Description |
|---|
| Matter
Interface for an elemental composition and mass tracking object.
|