| Package | Description |
|---|---|
| com.hfg.bio.seq | |
| com.hfg.bio.seq.format | |
| com.hfg.bio.seq.format.genbank | |
| com.hfg.citation.ncbi |
| Class and Description |
|---|
| SeqCitation
A citation with sequence location information.
|
| SeqIOException
Indicates an exception during sequence I/O manipulation.
|
| Class and Description |
|---|
| BufferedSeqReader
Buffered sequence reader.
|
| EMBL_DataClass
Enumerated list of EMBL data class.
|
| FASTA
FASTA sequence format.
|
| FASTQ
FASTQ sequence format encompassing sequences and their per-base sequencing quality scores.
|
| GenBank
GenBank sequence format.
|
| ReadableSeqFormat
Interface for readable sequence formats.
|
| ReadableSeqFormatBase
Base class for readable sequence formats.
|
| SeqCitation
A citation with sequence location information.
|
| SeqIOException
Indicates an exception during sequence I/O manipulation.
|
| WritableSeqFormat
Interface for writable sequence formats.
|
| Class and Description |
|---|
| SeqFormatException
Indicates an exception with the format of the sequence record being read.
|
| SeqIOException
Indicates an exception during sequence I/O manipulation.
|
| Class and Description |
|---|
| SeqCitation
A citation with sequence location information.
|
jataylor@hairyfatguy.com