Uses of Class
com.hfg.bio.seq.pattern.SeqPatternMatch

Packages that use SeqPatternMatch

Package	Description
com.hfg.bio.molbio
com.hfg.bio.seq.pattern

Uses of SeqPatternMatch in com.hfg.bio.molbio

Subclasses of SeqPatternMatch in com.hfg.bio.molbio

Modifier and Type	Class and Description
class	RestrictionSite Container for a restriction site.

Uses of SeqPatternMatch in com.hfg.bio.seq.pattern

Classes in com.hfg.bio.seq.pattern with type parameters of type SeqPatternMatch

Modifier and Type	Class and Description
class	SeqPattern<S extends BioSequence,T extends SeqPatternMatch> Abstract container for a sequence pattern (motif).
interface	SeqPatternMatcher<S extends BioSequence,T extends SeqPatternMatch>

Subclasses of SeqPatternMatch in com.hfg.bio.seq.pattern

Modifier and Type	Class and Description
class	NucleotidePatternMatch Container for a nucleotide pattern match.
class	ProteinPatternMatch Container for a protein pattern match.

Methods in com.hfg.bio.seq.pattern that return SeqPatternMatch

Modifier and Type	Method and Description
SeqPatternMatch	SeqPatternMatch.setNumMismatches(int inValue)
SeqPatternMatch	SeqPatternMatch.setSequence(String inValue)