GenomicAssemblyLevel (com.hfg API Documentation)

java.lang.Object
- com.hfg.bio.seq.genomic.assembly.GenomicAssemblyLevel

All Implemented Interfaces:

Serializable, Comparable<GenomicAssemblyLevel>
```
public final class GenomicAssemblyLevel
extends Object
implements Serializable, Comparable<GenomicAssemblyLevel>
```
Enumeration of genomic assembly levels.

See Also:

Serialized Form

Field Summary

Fields
Modifier and Type	Field and Description
`static GenomicAssemblyLevel`	`CHROMOSOME`
`static GenomicAssemblyLevel`	`COMPLETE_GENOME`
`static GenomicAssemblyLevel`	`CONTIG`
`static GenomicAssemblyLevel`	`SCAFFOLD`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`int`	`compareTo(GenomicAssemblyLevel inObj2)` Compares this object with the specified object for order.
`boolean`	`equals(Object inObj)`
`int`	`hashCode()`
`String`	`name()`
`String`	`toString()`
`static GenomicAssemblyLevel`	`valueOf(String inValue)`
`static GenomicAssemblyLevel[]`	`values()`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

- Field Detail
  - COMPLETE_GENOME
```
public static final GenomicAssemblyLevel COMPLETE_GENOME
```
  - CHROMOSOME
```
public static final GenomicAssemblyLevel CHROMOSOME
```
  - SCAFFOLD
```
public static final GenomicAssemblyLevel SCAFFOLD
```
  - CONTIG
```
public static final GenomicAssemblyLevel CONTIG
```
- Method Detail
  - toString
```
public final String toString()
```
    Overrides:
    
    toString in class Object
  - valueOf
```
public static GenomicAssemblyLevel valueOf(String inValue)
```
  - values
```
public static GenomicAssemblyLevel[] values()
```
  - name
```
public final String name()
```
  - hashCode
```
public final int hashCode()
```
    Overrides:
    
    hashCode in class Object
  - equals
```
public final boolean equals(Object inObj)
```
    Overrides:
    
    equals in class Object
  - compareTo
```
public int compareTo(GenomicAssemblyLevel inObj2)
```
    Compares this object with the specified object for order. Returns a negative integer, zero, or a positive integer as this object is less than, equal to, or greater than the specified object.
    The implementor must ensure sgn(x.compareTo(y)) == -sgn(y.compareTo(x)) for all x and y. (This implies that x.compareTo(y) must throw an exception iff y.compareTo(x) throws an exception.)
    The implementor must also ensure that the relation is transitive: (x.compareTo(y) > 0 && y.compareTo(z) > 0) implies x.compareTo(z) > 0.
    Finally, the implementor must ensure that x.compareTo(y)==0 implies that sgn(x.compareTo(z)) == sgn(y.compareTo(z)), for all z.
    It is strongly recommended, but not strictly required that (x.compareTo(y)==0) == (x.equals(y)). Generally speaking, any class that implements the Comparable interface and violates this condition should clearly indicate this fact. The recommended language is "Note: this class has a natural ordering that is inconsistent with equals."
    In the foregoing description, the notation sgn(expression) designates the mathematical signum function, which is defined to return one of -1, 0, or 1 according to whether the value of expression is negative, zero, or positive, respectively.
    
    Specified by:
    
    compareTo in interface Comparable<GenomicAssemblyLevel>
    
    Parameters:
    
    inObj2 - the object to be compared.
    
    Returns:
    
    a negative integer, zero, or a positive integer as this object is less than, equal to, or greater than the specified object.
    
    Throws:
    
    ClassCastException - if the specified object's type prevents it from being compared to this object.

Class GenomicAssemblyLevel

Field Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

COMPLETE_GENOME

CHROMOSOME

SCAFFOLD

CONTIG

Method Detail

toString

valueOf

values

name

hashCode

equals

compareTo