com.hfg.bio.seq.translation

Class StandardTranslationTable

java.lang.Object

com.hfg.bio.seq.translation.StandardTranslationTable

All Implemented Interfaces:

TranslationTable

public class StandardTranslationTable
extends Object
implements TranslationTable

Standard translation table for mapping codons to amino acids.

Method Summary

Modifier and Type	Method and Description
static StandardTranslationTable	getInstance()
char	translateCodon(String inCodon) Converts the specified codon (3 nucleotides) into a character representing the corresponding amino acid.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface com.hfg.bio.seq.translation.TranslationTable

isStopCodon

Method Detail

getInstance

public static StandardTranslationTable getInstance()

translateCodon

public char translateCodon(String inCodon)

Converts the specified codon (3 nucleotides) into a character representing the corresponding amino acid.

Specified by:

translateCodon in interface TranslationTable

Parameters:

inCodon - 3-letter nucleotide (DNA or RNA) string to be translated

Returns:

single letter amino acid