com.hfg.bio.seq.alignment.muscle

Enum MuscleOutputFormat

java.lang.Object

java.lang.Enum<MuscleOutputFormat>

com.hfg.bio.seq.alignment.muscle.MuscleOutputFormat

All Implemented Interfaces:

Serializable, Comparable<MuscleOutputFormat>

public enum MuscleOutputFormat
extends Enum<MuscleOutputFormat>

Enum Constant Summary

Enum Constants

Enum Constant and Description
clw CLUSTALW format
clwstrict CLUSTALW 1.81 format
fasta FASTA format
html HTML format
msf MSF format

Method Summary

Modifier and Type	Method and Description
static MuscleOutputFormat	valueOf(String name) Returns the enum constant of this type with the specified name.
static MuscleOutputFormat[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

clw

public static final MuscleOutputFormat clw

CLUSTALW format

clwstrict

public static final MuscleOutputFormat clwstrict

CLUSTALW 1.81 format

fasta

public static final MuscleOutputFormat fasta

FASTA format

html

public static final MuscleOutputFormat html

HTML format

msf

public static final MuscleOutputFormat msf

MSF format

Method Detail

values

public static MuscleOutputFormat[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (MuscleOutputFormat c : MuscleOutputFormat.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static MuscleOutputFormat valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null