Uses of Class
com.hfg.bio.seq.alignment.AlignedSeq

Packages that use AlignedSeq

Package	Description
com.hfg.bio.seq.alignment

Uses of AlignedSeq in com.hfg.bio.seq.alignment

Subclasses of AlignedSeq in com.hfg.bio.seq.alignment

Modifier and Type	Class and Description
class	AlignedQuery Container for the aligned query sequence part of a pairwise sequence alignment.
class	AlignedSubject Container for the aligned subject sequence part of a pairwise sequence alignment.

Methods in com.hfg.bio.seq.alignment that return AlignedSeq

Modifier and Type	Method and Description
AlignedSeq	AlignedSeq.clone()
AlignedSeq	AlignedSeq.setAlignedSeq(CharSequence inValue)
AlignedSeq	AlignedSeq.setSeq(BioSequence inValue)