001package com.hfg.bio.seq.format.feature.uniprot;
002
003import java.util.Collection;
004import java.util.HashMap;
005import java.util.Map;
006
007import com.hfg.bio.seq.format.GenBank;
008import com.hfg.util.StringUtil;
009
010//------------------------------------------------------------------------------
011/**
012 UniProt feature table qualifier names for flat-file records.
013 <div>
014 @author J. Alex Taylor, hairyfatguy.com
015 </div>
016 */
017//------------------------------------------------------------------------------
018// com.hfg Library
019//
020// This library is free software; you can redistribute it and/or
021// modify it under the terms of the GNU Lesser General Public
022// License as published by the Free Software Foundation; either
023// version 2.1 of the License, or (at your option) any later version.
024//
025// This library is distributed in the hope that it will be useful,
026// but WITHOUT ANY WARRANTY; without even the implied warranty of
027// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
028// Lesser General Public License for more details.
029//
030// You should have received a copy of the GNU Lesser General Public
031// License along with this library; if not, write to the Free Software
032// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
033//
034// J. Alex Taylor, President, Founder, CEO, COO, CFO, OOPS hairyfatguy.com
035// jataylor@hairyfatguy.com
036//------------------------------------------------------------------------------
037
038public class UniProtFeatureQualifierName
039{
040   private String mName;
041
042   private static Map<String, UniProtFeatureQualifierName> sUniqueMap = new HashMap<>();
043
044   public static final UniProtFeatureQualifierName FTId           = new UniProtFeatureQualifierName("FTId"); // Unique and stable feature identifier
045
046   //###########################################################################
047   // CONSTRUCTORS
048   //###########################################################################
049
050   //---------------------------------------------------------------------------
051   private UniProtFeatureQualifierName(String inName)
052   {
053      mName = inName;
054      sUniqueMap.put(mName, this);
055   }
056
057   //###########################################################################
058   // PUBLIC METHODS
059   //###########################################################################
060
061   //---------------------------------------------------------------------------
062   public static UniProtFeatureQualifierName valueOf(String inValue)
063   {
064      UniProtFeatureQualifierName qualifierName = sUniqueMap.get(inValue);
065      if (null == qualifierName)
066      {
067         qualifierName = new UniProtFeatureQualifierName(inValue);
068         GenBank.getLogger().warning(StringUtil.singleQuote(inValue) + " is not a recognized UniProt feature qualifier!");
069      }
070
071      return qualifierName;
072   }
073
074   //---------------------------------------------------------------------------
075   public static Collection<UniProtFeatureQualifierName> values()
076   {
077      return sUniqueMap.values();
078   }
079
080   //---------------------------------------------------------------------------
081   public String name()
082   {
083      return mName;
084   }
085
086   //---------------------------------------------------------------------------
087   @Override
088   public String toString()
089   {
090      return name();
091   }
092}