001package com.hfg.bio.seq.format;
002
003
004import com.hfg.bio.seq.BioSequence;
005
006import java.io.Writer;
007
008//------------------------------------------------------------------------------
009/**
010 Interface for writable sequence formats.
011 <div>
012   @author J. Alex Taylor, hairyfatguy.com
013 </div>
014 */
015//------------------------------------------------------------------------------
016// com.hfg Library
017//
018// This library is free software; you can redistribute it and/or
019// modify it under the terms of the GNU Lesser General Public
020// License as published by the Free Software Foundation; either
021// version 2.1 of the License, or (at your option) any later version.
022//
023// This library is distributed in the hope that it will be useful,
024// but WITHOUT ANY WARRANTY; without even the implied warranty of
025// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
026// Lesser General Public License for more details.
027//
028// You should have received a copy of the GNU Lesser General Public
029// License along with this library; if not, write to the Free Software
030// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
031//
032// J. Alex Taylor, President, Founder, CEO, COO, CFO, OOPS hairyfatguy.com
033// jataylor@hairyfatguy.com
034//------------------------------------------------------------------------------
035
036public interface WritableSeqFormat<T extends BioSequence>
037{
038   public String write(T inSeq) throws SeqIOException;
039
040   public void write(T inSeq, Writer inWriter) throws SeqIOException;
041}