001package com.hfg.bio.molbio;
002
003
004import com.hfg.bio.seq.SeqLocation;
005import com.hfg.bio.seq.pattern.NucleotidePatternMatch;
006
007//------------------------------------------------------------------------------
008/**
009 Container for a restriction site.
010 <div>
011 @author J. Alex Taylor, hairyfatguy.com
012 </div>
013 */
014//------------------------------------------------------------------------------
015// com.hfg Library
016//
017// This library is free software; you can redistribute it and/or
018// modify it under the terms of the GNU Lesser General Public
019// License as published by the Free Software Foundation; either
020// version 2.1 of the License, or (at your option) any later version.
021//
022// This library is distributed in the hope that it will be useful,
023// but WITHOUT ANY WARRANTY; without even the implied warranty of
024// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
025// Lesser General Public License for more details.
026//
027// You should have received a copy of the GNU Lesser General Public
028// License along with this library; if not, write to the Free Software
029// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
030//
031// J. Alex Taylor, President, Founder, CEO, COO, CFO, OOPS hairyfatguy.com
032// jataylor@hairyfatguy.com
033//------------------------------------------------------------------------------
034
035public class RestrictionSite extends NucleotidePatternMatch
036{
037   //###########################################################################
038   // CONSTRUCTORS
039   //###########################################################################
040
041   //--------------------------------------------------------------------------
042   public RestrictionSite(RestrictionEnzyme inRestrictionEnzyme, String inSeq, SeqLocation inLocation)
043   {
044      super(inRestrictionEnzyme, inSeq, inLocation);
045   }
046
047   //###########################################################################
048   // PUBLIC METHODS
049   //###########################################################################
050
051   //--------------------------------------------------------------------------
052   public RestrictionEnzyme getRestrictionEnzyme()
053   {
054      return (RestrictionEnzyme) getPattern();
055   }
056}