The com-hfg Java library from hairyfatguy.com is a utility library that makes it easy to construct XML, HTML, XHTML, or SVG in an object-oriented way from within your Java application or webapp. It also contains other IO utilities, bioinformatics classes for phylogenetic trees, taxonomy, multi-chain proteins, a configurable global/local sequence alignment implementation, and much more.

Compiled for JDK1.8+

• A brief set of examples:
  • XML
  • HTML
  • SVG
  • Word .docx
  • Excel .xlsx
  • Unit & Quantity
  • Chemistry
  • Protein Calculations
  • Sequence Format Reading/Writing
  
  
• Available for use with Maven or Gradle via Maven Central. Group: com.hairyfatguy Name: com_hfg
• JavaDoc (Generated with source code display option. Click on class names to view the source.)
• Dependencies:

  Jar	Needed to Compile	Source	Notes
  ant.jar	Yes	Download Ant from http://ant.apache.org/. ant.jar is found in the lib directory.	Needed for compliling the Ant tasks
  commons-net.jar	Yes	Download from http://commons.apache.org/proper/commons-net/download_net.cgi.	Needed for using FTP with RemoteFile classes
  javax.servlet3.0.jar	Yes	Download from http://download.oracle.com/otndocs/jcp/servlet-3.0-fr-eval-oth-JSpec/.	Used by the com.hfg.webapp classes
  postgresql.jar	Yes	Download from https://jdbc.postgresql.org/download.html.	Used by the com.hfg.sql.jdbc.postgresql classes
  guava.jar	Yes	Download from https://github.com/google/guava.	Used by the com.hfg.bio.ms Mass Spec classes
  junit.jar [and hamcrest.jar]	Yes	Download from http://junit.org.	Used by test classes

• Main project site on SourceForge